BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E08SP1|AL430403
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1314 0.0
3x_Contig439 391 e-108
>3x_Contig1763
Length = 22654
Score = 1314 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 284 gaaacaagaaatggaacgtgctgaaagagattatgagattttcctacaagaattggagga 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaacaagaaatggaacgtgctgaaagagattatgagattttcctacaagaattggagga 60
Query: 344 agatgaggaaatgagacaaacaatcaatctatataagagcaacaaaccagcagagcacga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgaggaaatgagacaaacaatcaatctatataagagcaacaaaccagcagagcacga 120
Query: 404 aggcgagatggaagaagatgaagatgaagatgctccacaaattgatattgatgaactatt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggcgagatggaagaagatgaagatgaagatgctccacaaattgatattgatgaactatt 180
Query: 464 agatgagttggatgagatgactttagaagatcaacaacaaggtgaagaaatgctatagaa 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgagttggatgagatgactttagaagatcaacaacaaggtgaagaaatgctatagaa 240
Query: 524 tttggtttagtctcttcttgtttggacaataattacaatatatatttacgagataggcaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggtttagtctcttcttgtttggacaataattacaatatatatttacgagataggcaa 300
Query: 584 gttagttgaatttactcatcatctgcattagatcaatgatacaatggccgtcttgtatag 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttagttgaatttactcatcatctgcattagatcaatgatacaatggccgtcttgtatag 360
Query: 644 tgtacactagtgaatattaataattggcatgtttcagggtaacaatgctttcctgagttt 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtacactagtgaatattaataattggcatgtttcagggtaacaatgctttcctgagttt 420
Query: 704 agttcattcttgtaaaaaagacgtcgattcgtaatactaccctgatacactataccctta 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttcattcttgtaaaaaagacgtcgattcgtaatactaccctgatacactataccctta 480
Query: 764 actgcagtgcatagataaataaagtaaaccaagaagtactattctttcttcatggaacaa 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgcagtgcatagataaataaagtaaaccaagaagtactattctttcttcatggaacaa 540
Query: 824 aacctgagtaccaggaaagatgcttaacgatcttaagttttcaccagcttttaagtcttt 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacctgagtaccaggaaagatgcttaacgatcttaagttttcaccagcttttaagtcttt 600
Query: 884 tgttgatacctcgtttttccatgaattatcaagattaaaacttgaagtgttcaagttaga 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgttgatacctcgtttttccatgaattatcaagattaaaacttgaagtgttcaagttaga 660
Query: 944 ctc 946
|||
Sbjct: 661 ctc 663
>3x_Contig439
Length = 1488
Score = 391 bits (197), Expect = e-108
Identities = 245/253 (96%), Gaps = 6/253 (2%)
Strand = Plus / Plus
Query: 1 ctagatcttccgatctaggctccaatgaccaagtctattacgttagaacacatcttggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 ctagatcttccgatctaggctccaatgaccaagtctattacgttagaacacatcttggtg 1291
Query: 61 gtattattcatcctggtgacagtgtcatgggttactttatcgctaactctaactataact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 gtattattcatcctggtgacagtgtcatgggttactttatcgctaactctaactataact 1351
Query: 121 cagagctcttcgatggtttaaatattgattacgtgccagacatcgttctaatcaagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 cagagctcttcgatggtttaaatattgattacgtgccagacatcgttctaatcaagaaac 1411
Query: 181 tatatcaaagaaagacaaagaagaacagaaaatggaagttgaagagaatggctaaggaac 240
|||||| |||| |||||||| || |||| ||||||||| ||||||| |||||||||| ||
Sbjct: 1412 tatatc-aagagagacaaag-agcacag-aaatggaag-tgaagag-atggctaagg-ac 1465
Query: 241 acaaggatatcga 253
|||||||||||||
Sbjct: 1466 acaaggatatcga 1478
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9793
Number of Sequences: 1807
Number of extensions: 9793
Number of successful extensions: 158
Number of sequences better than 1.0e-20: 2
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)